Results
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Property | Organism | Value | Units | ID | Details |
---|---|---|---|---|---|
Length of RNA of 16S subunit of small subunit of ribosome | Bacteria Escherichia coli | 1541 | nucleotides | 102495 | Carbon P, Ehresmann C... |
Diffusion coefficient of 30S particle of ribosome in water | Bacteria Escherichia coli | 18.3 (±10) | μm^2/s | 107917 | Dobitchin PD, Kirillov SV... |
Number of proteins in small (30S) subunit of ribosome | Bacteria Escherichia coli | 22 (Table - link) | Unitless | 102497 | Arnold RJ, Reilly JP.... |
Maximal (extrapolated) fraction of ribosome-affiliated proteins out of total protein | Bacteria Escherichia coli | 55 | % | 106422 | Scott M, Gunderson CW... |
Number of elongation factor Tu (EF-Tu) per ribosome (most abundant protein in fast-growing) | Bacteria Escherichia coli | 6 - 7 | molecules/ribosome | 110048 | Klumpp S, Scott M, Pedersen S... |
Molecular mass of protein component of ribosome | Bacteria Escherichia coli | 1000 | kDalton | 100120 | http://redpoll.pharm... |
Mass of ribosome | bacteria | >2,500 | MDa | 111933 | Wilson DN, Nierhaus KH.... |
Length of RNA of 5S subunit of large subunit of ribosome | Bacteria Escherichia coli | 120 | nucleotides | 102494 | Neil R. Voss. 2006 'Geometric... |
Ribosome volume | Generic | 1.4E-05 | μm^3 | 100482 | Roskams and Rodgers,... |
Probability of ribosome binding to mRNA | Bacteria Escherichia coli | 0.8 | unitless | 102043 | X. Sunney Xie, Paul J. Choi... |
Dimensions of ribosome | Budding yeast Saccharomyces cerevisiae | height ~254 Å: width ~278 Å: thickness ~267 Å | Å | 111542 | Verschoor A, Warner JR... |
Ribosome diameter | Generic | 30 | nm | 100483 | Roskams and Rodgers,... |
Residence time of TF (trigger factor) protein on ribosome | Bacteria Escherichia coli | ~10 | sec | 113351 | Kim YE, Hipp MS, Bracher A... |
Ribosome efficiency | Budding yeast Saccharomyces cerevisiae | 8.8 fast growing cells: 5.2 slow growing cells | aa/sec/ribosome | 106224 | Waldron C, Jund R, Lacroute... |
Ribosome footprint | Unspecified | ~28 | Nucleotides | 107874 | Ingolia NT. Genome-wide... |
Ribosome enumeration | Mycobacterium tuberculosis | Table - link | N/A | 111989 | Yamada H, Yamaguchi M... |
Ribosome footprints | Budding yeast Saccharomyces cerevisiae | typical footprint 28-29: stalled at an mRNA 3′ end ~15: closely stacked diribosomes ~80 | nucleotides | 114272 | Joazeiro CAP, Ribosomal... |
Mass of bacterial ribosome | bacteria | 2.5 (Table - link) | MDa | 106864 | Benjamin Lewin, Genes VIII... |
Decrease of observed ribosome density compared to maximum theoretical packing | Unspecified | ~3 | Fold lower | 107778 | Piques et al., Ribosome... |
Number of proteins in ribosome | Budding yeast Saccharomyces cerevisiae | 78 | unitless | 102476 | Planta RJ, Mager WH.... |